Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 PRSS30P-206ENST00000641773 873 ntBASIC15.57■□□□□ 0.08
ATP11CQ8NB49 LINC01230-201ENST00000625222 3017 ntBASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATP11CQ8NB49 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AC027601.5-201ENST00000624065 2482 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 ACTBP8-201ENST00000403258 1108 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AL139094.1-201ENST00000405549 1188 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AP005482.1-201ENST00000563722 1273 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 COX11-210ENST00000639671 696 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.56■□□□□ 0.08
ATP11CQ8NB49 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATP11CQ8NB49 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ATP11CQ8NB49 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATP11CQ8NB49 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms