Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC139712.1-201ENST00000378256 1875 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC087481.3-201ENST00000602886 1894 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AF274858.1-201ENST00000406288 372 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC008026.2-201ENST00000495438 348 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AL591471.1-201ENST00000621855 229 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL23A1Q86Y22 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.23■□□□□ 0.51
COL23A1Q86Y22 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC006529.1-201ENST00000459978 637 ntBASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.22■□□□□ 0.51
COL23A1Q86Y22 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC018846.1-201ENST00000568231 183 ntBASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 RN7SL121P-201ENST00000584223 273 ntBASIC18.22■□□□□ 0.51
COL23A1Q86Y22 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
COL23A1Q86Y22 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AP005117.1-202ENST00000581724 1908 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 LINC01101-201ENST00000622953 1884 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 NHP2P1-201ENST00000335274 462 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 CTSL-202ENST00000342020 933 ntTSL 2 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AL451000.1-201ENST00000451300 1186 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL23A1Q86Y22 KRT8P2-201ENST00000556193 944 ntBASIC18.21■□□□□ 0.51
COL23A1Q86Y22 NDUFB10P1-201ENST00000567319 521 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms