Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AL139400.1-201ENST00000366220 510 ntBASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ZNF890P-202ENST00000530367 1156 ntBASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 DUX4L47-201ENST00000566374 394 ntBASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AC107373.2-201ENST00000607735 490 ntBASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AL844908.2-201ENST00000609461 460 ntBASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC087499.5-201ENST00000452760 1342 ntBASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC026410.3-201ENST00000514280 936 ntBASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC073592.8-201ENST00000624126 511 ntBASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC215219.1-201ENST00000400706 1817 ntBASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 AC027612.1-201ENST00000445234 2395 ntBASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRTM1Q86UE6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
LRRTM1Q86UE6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms