Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC134915.1-201ENST00000426461 574 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SNX29P1-201ENST00000548357 1007 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MIR4259-201ENST00000584466 101 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 BRI3BPP1-201ENST00000594224 787 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 MIR6775-201ENST00000617557 69 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 RPSAP52-203ENST00000622976 1023 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AC005912.2-201ENST00000619492 2400 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC9.97□□□□□ -0.81
SCXQ7RTU7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SCXQ7RTU7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.97□□□□□ -0.81
SCXQ7RTU7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 AC112504.1-201ENST00000623415 1841 ntBASIC9.96□□□□□ -0.81
SCXQ7RTU7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC9.96□□□□□ -0.81
SCXQ7RTU7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SCXQ7RTU7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SCXQ7RTU7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 TOMM22P5-201ENST00000416399 439 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC136604.1-201ENST00000418535 575 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC9.96□□□□□ -0.82
SCXQ7RTU7 AC119751.2-201ENST00000504529 210 ntBASIC9.96□□□□□ -0.82
SCXQ7RTU7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms