Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.68□□□□□ -0.06
CDKL1Q00532 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.68□□□□□ -0.06
CDKL1Q00532 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.68□□□□□ -0.06
CDKL1Q00532 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 CRB3P1-201ENST00000449338 276 ntBASIC14.68□□□□□ -0.06
CDKL1Q00532 AC093433.1-201ENST00000458048 571 ntBASIC14.68□□□□□ -0.06
CDKL1Q00532 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.68□□□□□ -0.06
CDKL1Q00532 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 AC027612.1-201ENST00000445234 2395 ntBASIC14.68□□□□□ -0.06
CDKL1Q00532 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 PTENP1-202ENST00000532280 3996 ntBASIC14.67□□□□□ -0.06
CDKL1Q00532 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDKL1Q00532 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDKL1Q00532 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CDKL1Q00532 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 ACTG1P3-201ENST00000431775 1114 ntBASIC14.67□□□□□ -0.06
CDKL1Q00532 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.67□□□□□ -0.06
CDKL1Q00532 TPT1P11-201ENST00000458482 498 ntBASIC14.67□□□□□ -0.06
CDKL1Q00532 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
CDKL1Q00532 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDKL1Q00532 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL1Q00532 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL1Q00532 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 AC152010.1-201ENST00000415779 2006 ntBASIC14.66□□□□□ -0.06
CDKL1Q00532 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CDKL1Q00532 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL1Q00532 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL1Q00532 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms