Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AGGF1P10-201ENST00000635005 2191 ntBASIC15.53■□□□□ 0.08
CBX1P83916 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.53■□□□□ 0.08
CBX1P83916 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC15.53■□□□□ 0.08
CBX1P83916 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.53■□□□□ 0.08
CBX1P83916 PI4KAP2-201ENST00000360806 2080 ntBASIC15.53■□□□□ 0.08
CBX1P83916 HSPA8P5-201ENST00000456928 2069 ntBASIC15.53■□□□□ 0.08
CBX1P83916 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX1P83916 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX1P83916 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CBX1P83916 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX1P83916 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX1P83916 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CBX1P83916 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX1P83916 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CBX1P83916 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX1P83916 AL645929.1-201ENST00000420084 975 ntBASIC15.52■□□□□ 0.08
CBX1P83916 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.52■□□□□ 0.08
CBX1P83916 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX1P83916 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX1P83916 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.52■□□□□ 0.08
CBX1P83916 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.52■□□□□ 0.08
CBX1P83916 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX1P83916 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX1P83916 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX1P83916 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX1P83916 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX1P83916 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX1P83916 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CBX1P83916 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CBX1P83916 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CBX1P83916 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX1P83916 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX1P83916 AL445250.1-201ENST00000641671 2259 ntBASIC15.52■□□□□ 0.07
CBX1P83916 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
CBX1P83916 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX1P83916 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.52■□□□□ 0.07
CBX1P83916 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX1P83916 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.52■□□□□ 0.07
CBX1P83916 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 AL355102.3-201ENST00000554299 1678 ntBASIC15.51■□□□□ 0.07
CBX1P83916 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 RNF152P1-201ENST00000397754 604 ntBASIC15.51■□□□□ 0.07
CBX1P83916 PHKG1P2-201ENST00000457537 863 ntBASIC15.51■□□□□ 0.07
CBX1P83916 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX1P83916 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX1P83916 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 AL139424.1-201ENST00000607572 797 ntBASIC15.51■□□□□ 0.07
CBX1P83916 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX1P83916 AC083849.1-201ENST00000615227 514 ntBASIC15.51■□□□□ 0.07
CBX1P83916 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX1P83916 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 AC027020.2-201ENST00000602585 2389 ntBASIC15.51■□□□□ 0.07
CBX1P83916 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX1P83916 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX1P83916 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms