Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SPCS3P61009 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SPCS3P61009 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.21□□□□□ -0.46
SPCS3P61009 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPCS3P61009 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 AL928921.2-201ENST00000641325 2442 ntBASIC12.2□□□□□ -0.46
SPCS3P61009 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SPCS3P61009 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.2□□□□□ -0.46
SPCS3P61009 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SPCS3P61009 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.2□□□□□ -0.46
SPCS3P61009 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPCS3P61009 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SPCS3P61009 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SPCS3P61009 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 MIR193BHG-211ENST00000641433 5365 ntBASIC12.19□□□□□ -0.46
SPCS3P61009 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms