Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.61□□□□□ -0.23
CENPAP49450 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 AL645937.2-201ENST00000396808 931 ntBASIC13.61□□□□□ -0.23
CENPAP49450 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.61□□□□□ -0.23
CENPAP49450 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.61□□□□□ -0.23
CENPAP49450 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 AC140479.7-201ENST00000636301 2332 ntBASIC13.61□□□□□ -0.23
CENPAP49450 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 LILRP1-201ENST00000444199 1370 ntBASIC13.6□□□□□ -0.23
CENPAP49450 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 AC007191.1-201ENST00000623179 2995 ntBASIC13.6□□□□□ -0.23
CENPAP49450 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.6□□□□□ -0.23
CENPAP49450 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 AC114501.2-201ENST00000439631 535 ntBASIC13.6□□□□□ -0.23
CENPAP49450 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 AL589987.1-201ENST00000453380 819 ntBASIC13.6□□□□□ -0.23
CENPAP49450 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.6□□□□□ -0.23
CENPAP49450 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CENPAP49450 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 AL158212.4-201ENST00000624062 1286 ntBASIC13.6□□□□□ -0.23
CENPAP49450 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.6□□□□□ -0.23
CENPAP49450 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 AC018442.1-201ENST00000421439 2061 ntBASIC13.6□□□□□ -0.23
CENPAP49450 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 CSPG4P11-201ENST00000560634 4910 ntBASIC13.6□□□□□ -0.23
CENPAP49450 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CENPAP49450 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CENPAP49450 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms