Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 RN7SKP230-201ENST00000365642 335 ntBASIC15.7■□□□□ 0.1
RFC1P35251 AC092933.1-201ENST00000393644 945 ntBASIC15.7■□□□□ 0.1
RFC1P35251 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC1P35251 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC1P35251 TLE1P1-201ENST00000422965 589 ntBASIC15.7■□□□□ 0.1
RFC1P35251 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC1P35251 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC1P35251 TTTY23B-201ENST00000442790 549 ntBASIC15.7■□□□□ 0.1
RFC1P35251 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 BCRP2-202ENST00000447763 634 ntBASIC15.7■□□□□ 0.1
RFC1P35251 BCRP6-201ENST00000510112 632 ntBASIC15.7■□□□□ 0.1
RFC1P35251 BCRP7-201ENST00000511549 544 ntBASIC15.7■□□□□ 0.1
RFC1P35251 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 AC025279.2-201ENST00000569730 653 ntBASIC15.7■□□□□ 0.1
RFC1P35251 RN7SL48P-201ENST00000579283 293 ntBASIC15.7■□□□□ 0.1
RFC1P35251 AC015936.2-201ENST00000593177 259 ntBASIC15.7■□□□□ 0.1
RFC1P35251 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC1P35251 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 AC020910.5-201ENST00000623668 1865 ntBASIC15.69■□□□□ 0.1
RFC1P35251 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC1P35251 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC1P35251 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 AL035633.1-201ENST00000406139 838 ntBASIC15.69■□□□□ 0.1
RFC1P35251 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.69■□□□□ 0.1
RFC1P35251 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC1P35251 NME2P1-201ENST00000426182 414 ntBASIC15.69■□□□□ 0.1
RFC1P35251 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 AL355864.2-201ENST00000447420 863 ntBASIC15.69■□□□□ 0.1
RFC1P35251 MESTP3-201ENST00000503460 968 ntBASIC15.69■□□□□ 0.1
RFC1P35251 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 AC132938.4-201ENST00000623835 848 ntBASIC15.69■□□□□ 0.1
RFC1P35251 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 AC105233.6-201ENST00000642093 218 ntBASIC15.69■□□□□ 0.1
RFC1P35251 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC1P35251 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFC1P35251 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.69■□□□□ 0.1
RFC1P35251 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC1P35251 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFC1P35251 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms