Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.05■□□□□ 0.48
TM4SF1P30408 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.05■□□□□ 0.48
TM4SF1P30408 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TM4SF1P30408 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 AC007950.2-201ENST00000615045 2347 ntBASIC18.04■□□□□ 0.48
TM4SF1P30408 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 AL591122.2-201ENST00000624125 1853 ntBASIC18.04■□□□□ 0.48
TM4SF1P30408 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF1P30408 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TM4SF1P30408 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.04■□□□□ 0.48
TM4SF1P30408 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF1P30408 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.04■□□□□ 0.48
TM4SF1P30408 AC140658.4-201ENST00000561990 352 ntBASIC18.04■□□□□ 0.48
TM4SF1P30408 AC148477.9-201ENST00000623974 539 ntBASIC18.04■□□□□ 0.48
TM4SF1P30408 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TM4SF1P30408 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.04■□□□□ 0.48
TM4SF1P30408 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TM4SF1P30408 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF1P30408 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.03■□□□□ 0.48
TM4SF1P30408 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.03■□□□□ 0.48
TM4SF1P30408 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 RN7SL564P-201ENST00000496309 250 ntBASIC18.03■□□□□ 0.48
TM4SF1P30408 IGHV1-12-201ENST00000518307 205 ntBASIC18.03■□□□□ 0.48
TM4SF1P30408 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.03■□□□□ 0.48
TM4SF1P30408 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.03■□□□□ 0.48
TM4SF1P30408 MIR6746-201ENST00000620971 63 ntBASIC18.03■□□□□ 0.48
TM4SF1P30408 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.03■□□□□ 0.48
TM4SF1P30408 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 AC067931.2-201ENST00000623655 2003 ntBASIC18.03■□□□□ 0.48
TM4SF1P30408 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TM4SF1P30408 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TM4SF1P30408 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TM4SF1P30408 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.02■□□□□ 0.48
TM4SF1P30408 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms