Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.77■□□□□ 0.43
CHGBP05060 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHGBP05060 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
CHGBP05060 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHGBP05060 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHGBP05060 MBLAC2-202ENST00000514906 1936 ntBASIC17.76■□□□□ 0.43
CHGBP05060 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CHGBP05060 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHGBP05060 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
CHGBP05060 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 AC044849.1-201ENST00000519737 1188 ntBASIC17.76■□□□□ 0.43
CHGBP05060 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.76■□□□□ 0.43
CHGBP05060 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHGBP05060 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.76■□□□□ 0.43
CHGBP05060 MIR4525-201ENST00000580000 75 ntBASIC17.76■□□□□ 0.43
CHGBP05060 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHGBP05060 AGGF1P1-201ENST00000509500 2073 ntBASIC17.76■□□□□ 0.43
CHGBP05060 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHGBP05060 KHSRPP1-201ENST00000427983 1768 ntBASIC17.76■□□□□ 0.43
CHGBP05060 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHGBP05060 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHGBP05060 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHGBP05060 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.75■□□□□ 0.43
CHGBP05060 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHGBP05060 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHGBP05060 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 AC007191.1-201ENST00000623179 2995 ntBASIC17.75■□□□□ 0.43
CHGBP05060 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHGBP05060 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.75■□□□□ 0.43
CHGBP05060 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.75■□□□□ 0.43
CHGBP05060 AC104073.2-201ENST00000453737 312 ntBASIC17.75■□□□□ 0.43
CHGBP05060 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.75■□□□□ 0.43
CHGBP05060 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHGBP05060 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.75■□□□□ 0.43
CHGBP05060 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHGBP05060 AC005962.1-201ENST00000584100 773 ntBASIC17.75■□□□□ 0.43
CHGBP05060 AC243960.2-201ENST00000600996 747 ntBASIC17.75■□□□□ 0.43
CHGBP05060 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHGBP05060 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHGBP05060 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHGBP05060 AC215219.1-201ENST00000400706 1817 ntBASIC17.75■□□□□ 0.43
CHGBP05060 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 AC011498.7-201ENST00000624986 2027 ntBASIC17.74■□□□□ 0.43
CHGBP05060 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHGBP05060 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.74■□□□□ 0.43
CHGBP05060 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHGBP05060 AC027601.3-201ENST00000622907 509 ntBASIC17.74■□□□□ 0.43
CHGBP05060 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 CYP4F23P-201ENST00000593402 1579 ntBASIC17.74■□□□□ 0.43
CHGBP05060 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 LINC01230-201ENST00000625222 3017 ntBASIC17.74■□□□□ 0.43
CHGBP05060 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHGBP05060 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.74■□□□□ 0.43
CHGBP05060 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms