Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.54□□□□□ -0.4
ABCA1O95477 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.54□□□□□ -0.4
ABCA1O95477 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ABCA1O95477 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ABCA1O95477 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.54□□□□□ -0.4
ABCA1O95477 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.54□□□□□ -0.4
ABCA1O95477 AL805961.1-203ENST00000641078 1258 ntBASIC12.54□□□□□ -0.4
ABCA1O95477 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.54□□□□□ -0.4
ABCA1O95477 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ABCA1O95477 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.54□□□□□ -0.4
ABCA1O95477 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ABCA1O95477 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.54□□□□□ -0.4
ABCA1O95477 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ABCA1O95477 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 DPM3-202ENST00000368399 517 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.53□□□□□ -0.4
ABCA1O95477 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 AC114501.1-201ENST00000445949 172 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.53□□□□□ -0.4
ABCA1O95477 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 AC106881.1-201ENST00000605849 3329 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 AL596276.2-201ENST00000447525 331 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 CEP164P1-201ENST00000455142 418 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.53□□□□□ -0.4
ABCA1O95477 AC024681.1-201ENST00000521917 487 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 AL133499.1-201ENST00000596207 608 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 AP000346.4-201ENST00000614827 381 ntBASIC12.53□□□□□ -0.4
ABCA1O95477 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
ABCA1O95477 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ABCA1O95477 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
ABCA1O95477 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 TNRC18P2-201ENST00000417666 2714 ntBASIC12.52□□□□□ -0.4
ABCA1O95477 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ABCA1O95477 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ABCA1O95477 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ABCA1O95477 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.52□□□□□ -0.4
ABCA1O95477 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ABCA1O95477 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ABCA1O95477 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 AL133466.1-201ENST00000447582 150 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.52□□□□□ -0.41
ABCA1O95477 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.52□□□□□ -0.41
ABCA1O95477 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 AC018635.2-201ENST00000608625 364 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 AC004923.1-202ENST00000642106 209 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms