Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 AP006294.1-201ENST00000415407 339 ntBASIC14.99□□□□□ -0.01
GPC4O75487 HLA-K-203ENST00000430151 1046 ntBASIC14.99□□□□□ -0.01
GPC4O75487 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 AP005018.1-201ENST00000525475 301 ntBASIC14.99□□□□□ -0.01
GPC4O75487 AP001582.1-201ENST00000525856 295 ntBASIC14.99□□□□□ -0.01
GPC4O75487 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 RPSAP52-203ENST00000622976 1023 ntBASIC14.99□□□□□ -0.01
GPC4O75487 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.99□□□□□ -0.01
GPC4O75487 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
GPC4O75487 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
GPC4O75487 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC4O75487 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 MTHFR-210ENST00000641407 2387 ntBASIC14.98□□□□□ -0.01
GPC4O75487 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC4O75487 AL122018.1-201ENST00000446607 2310 ntBASIC14.98□□□□□ -0.01
GPC4O75487 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GPC4O75487 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GPC4O75487 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC4O75487 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.98□□□□□ -0.01
GPC4O75487 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC4O75487 AL596325.1-201ENST00000563991 1082 ntBASIC14.98□□□□□ -0.01
GPC4O75487 AP001063.1-201ENST00000568332 529 ntBASIC14.98□□□□□ -0.01
GPC4O75487 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GPC4O75487 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 AP005019.2-201ENST00000615104 511 ntBASIC14.98□□□□□ -0.01
GPC4O75487 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GPC4O75487 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 AL157414.3-201ENST00000624276 1954 ntBASIC14.98□□□□□ -0.01
GPC4O75487 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GPC4O75487 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC4O75487 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.98□□□□□ -0.01
GPC4O75487 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC4O75487 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC4O75487 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms