Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC6.41□□□□□ -1.38
USH2AO75445 KRT8P1-201ENST00000557533 1207 ntBASIC6.41□□□□□ -1.38
USH2AO75445 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC6.41□□□□□ -1.38
USH2AO75445 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC6.41□□□□□ -1.38
USH2AO75445 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 STK24P1-201ENST00000455035 1291 ntBASIC6.41□□□□□ -1.38
USH2AO75445 RN7SL128P-201ENST00000467883 305 ntBASIC6.41□□□□□ -1.38
USH2AO75445 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AL365181.1-201ENST00000564032 1828 ntBASIC6.41□□□□□ -1.38
USH2AO75445 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
USH2AO75445 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 U3.41-201ENST00000408711 219 ntBASIC6.41□□□□□ -1.38
USH2AO75445 LINP1-201ENST00000417112 917 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 AC000077.1-201ENST00000420012 953 ntBASIC6.41□□□□□ -1.38
USH2AO75445 RPL18AP15-201ENST00000430258 517 ntBASIC6.41□□□□□ -1.38
USH2AO75445 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC6.41□□□□□ -1.38
USH2AO75445 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC6.41□□□□□ -1.38
USH2AO75445 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC6.41□□□□□ -1.38
USH2AO75445 GRAMD4P6-201ENST00000556999 244 ntBASIC6.41□□□□□ -1.38
USH2AO75445 PRR20FP-201ENST00000603320 180 ntBASIC6.41□□□□□ -1.38
USH2AO75445 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AIG1-203ENST00000367596 559 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC6.41□□□□□ -1.38
USH2AO75445 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 AC090616.6-202ENST00000583601 1088 ntBASIC6.41□□□□□ -1.38
USH2AO75445 AC113385.2-201ENST00000614465 762 ntBASIC6.41□□□□□ -1.38
USH2AO75445 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 OR4C14P-201ENST00000440929 923 ntBASIC6.4□□□□□ -1.38
USH2AO75445 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 AC095040.1-201ENST00000513286 675 ntBASIC6.4□□□□□ -1.38
USH2AO75445 AACSP1-202ENST00000521412 1095 ntBASIC6.4□□□□□ -1.38
USH2AO75445 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 AL139317.2-201ENST00000556998 158 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms