Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
O00370 AP000593.2-201ENST00000542775 1433 ntBASIC15.87■□□□□ 0.13
O00370 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.87■□□□□ 0.13
O00370 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
O00370 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
O00370 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
O00370 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
O00370 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 AC020910.5-201ENST00000623668 1865 ntBASIC15.87■□□□□ 0.13
O00370 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
O00370 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.87■□□□□ 0.13
O00370 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.87■□□□□ 0.13
O00370 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
O00370 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.87■□□□□ 0.13
O00370 KLF2P4-201ENST00000451959 1225 ntBASIC15.87■□□□□ 0.13
O00370 AC119751.2-201ENST00000504529 210 ntBASIC15.87■□□□□ 0.13
O00370 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
O00370 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.87■□□□□ 0.13
O00370 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.87■□□□□ 0.13
O00370 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.87■□□□□ 0.13
O00370 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.87■□□□□ 0.13
O00370 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.87■□□□□ 0.13
O00370 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.87■□□□□ 0.13
O00370 MIR6775-201ENST00000617557 69 ntBASIC15.87■□□□□ 0.13
O00370 BEND3P1-201ENST00000421591 1944 ntBASIC15.87■□□□□ 0.13
O00370 BX640514.1-201ENST00000583223 1918 ntBASIC15.87■□□□□ 0.13
O00370 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
O00370 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
O00370 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
O00370 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
O00370 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
O00370 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
O00370 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
O00370 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
O00370 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 AC022210.1-201ENST00000449856 793 ntBASIC15.86■□□□□ 0.13
O00370 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
O00370 AC131206.1-201ENST00000538078 1211 ntBASIC15.86■□□□□ 0.13
O00370 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 OR10B1P-201ENST00000601666 907 ntBASIC15.86■□□□□ 0.13
O00370 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
O00370 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.86■□□□□ 0.13
O00370 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.86■□□□□ 0.13
O00370 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.86■□□□□ 0.13
O00370 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
O00370 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
O00370 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms