Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.07□□□□□ -0.16
CLIC1O00299 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLIC1O00299 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.07□□□□□ -0.16
CLIC1O00299 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.07□□□□□ -0.16
CLIC1O00299 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLIC1O00299 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLIC1O00299 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIC1O00299 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.06□□□□□ -0.16
CLIC1O00299 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 MRPS18AP1-201ENST00000414458 589 ntBASIC14.06□□□□□ -0.16
CLIC1O00299 TLE1P1-201ENST00000422965 589 ntBASIC14.06□□□□□ -0.16
CLIC1O00299 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIC1O00299 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 AC104596.2-201ENST00000512793 793 ntBASIC14.06□□□□□ -0.16
CLIC1O00299 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIC1O00299 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
CLIC1O00299 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIC1O00299 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLIC1O00299 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 RN7SL832P-201ENST00000607781 1756 ntBASIC14.06□□□□□ -0.16
CLIC1O00299 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIC1O00299 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLIC1O00299 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC1O00299 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLIC1O00299 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLIC1O00299 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLIC1O00299 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CLIC1O00299 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC1O00299 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms