Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AC009093.10-201ENST00000641956 1442 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 LINC01101-201ENST00000622953 1884 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AC092638.2-201ENST00000441105 947 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AL354861.1-201ENST00000445213 355 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AP000911.2-201ENST00000534330 502 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 RN7SL470P-201ENST00000583069 259 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AC005357.2-202ENST00000590507 1060 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 AL136172.1-201ENST00000598590 1394 ntBASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC2Q9Y5Z7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC2Q9Y5Z7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 IL9RP3-201ENST00000442856 1674 ntBASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 KRT17P5-201ENST00000332088 839 ntBASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 HLA-DMA-203ENST00000395305 777 ntBASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 AC004837.1-201ENST00000446267 564 ntBASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 CR383656.3-201ENST00000551315 183 ntBASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC2Q9Y5Z7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms