Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 AC025181.2-201ENST00000606994 802 ntBASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 AC018665.1-201ENST00000622927 1362 ntBASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 AP3S2-216ENST00000617003 1561 ntBASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
ERGIC3Q9Y282 AP001972.5-201ENST00000624624 2338 ntBASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AL354702.1-201ENST00000442006 1960 ntBASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 SLED1-202ENST00000512051 380 ntBASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AL662844.1-201ENST00000546340 181 ntBASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
ERGIC3Q9Y282 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ERGIC3Q9Y282 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 AP002761.4-201ENST00000565433 3361 ntBASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ERGIC3Q9Y282 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms