Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC025678.2-201ENST00000562061 970 ntBASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MST1P2-201ENST00000457982 2291 ntBASIC13.35□□□□□ -0.27
COPS3Q9UNS2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC026410.3-201ENST00000514280 936 ntBASIC13.34□□□□□ -0.27
COPS3Q9UNS2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC004790.1-201ENST00000612686 536 ntBASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.34□□□□□ -0.27
COPS3Q9UNS2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
COPS3Q9UNS2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
COPS3Q9UNS2 TCAF1P1-201ENST00000414990 2232 ntBASIC13.33□□□□□ -0.27
COPS3Q9UNS2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
COPS3Q9UNS2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
COPS3Q9UNS2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms