Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 AC136621.1-201ENST00000624017 2304 ntBASIC21.3■■□□□ 1
MLH3Q9UHC1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 AC064801.2-201ENST00000625052 1303 ntBASIC21.3■■□□□ 1
MLH3Q9UHC1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.3■■□□□ 1
MLH3Q9UHC1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.3■■□□□ 1
MLH3Q9UHC1 AC092896.1-201ENST00000465850 380 ntBASIC21.3■■□□□ 1
MLH3Q9UHC1 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.3■■□□□ 1
MLH3Q9UHC1 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.3■■□□□ 1
MLH3Q9UHC1 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.3■■□□□ 1
MLH3Q9UHC1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
MLH3Q9UHC1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MLH3Q9UHC1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC21.29■■□□□ 1
MLH3Q9UHC1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.29■■□□□ 1
MLH3Q9UHC1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 PGAM1P11-201ENST00000416729 680 ntBASIC21.29■■□□□ 1
MLH3Q9UHC1 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC21.29■■□□□ 1
MLH3Q9UHC1 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 RN7SKP155-201ENST00000516031 288 ntBASIC21.29■■□□□ 1
MLH3Q9UHC1 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.29■■□□□ 1
MLH3Q9UHC1 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.29■■□□□ 1
MLH3Q9UHC1 AC005274.1-201ENST00000623460 802 ntBASIC21.29■■□□□ 1
MLH3Q9UHC1 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.29■■□□□ 1
MLH3Q9UHC1 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.29■■□□□ 1
MLH3Q9UHC1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MLH3Q9UHC1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.28■■□□□ 1
MLH3Q9UHC1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
MLH3Q9UHC1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.28■■□□□ 1
MLH3Q9UHC1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.28■■□□□ 1
MLH3Q9UHC1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
MLH3Q9UHC1 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.28■■□□□ 1
MLH3Q9UHC1 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.28■■□□□ 1
MLH3Q9UHC1 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC21.28■■□□□ 1
MLH3Q9UHC1 TYMSP2-201ENST00000589501 424 ntBASIC21.28■■□□□ 1
MLH3Q9UHC1 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.28■■□□□ 1
MLH3Q9UHC1 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.28■■□□□ 1
MLH3Q9UHC1 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.28■■□□□ 1
MLH3Q9UHC1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.28■■□□□ 1
MLH3Q9UHC1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.28■■□□□ 1
MLH3Q9UHC1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
MLH3Q9UHC1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MLH3Q9UHC1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.27■■□□□ 1
MLH3Q9UHC1 FAM21EP-201ENST00000417804 985 ntBASIC21.27■■□□□ 1
MLH3Q9UHC1 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.27■■□□□ 1
MLH3Q9UHC1 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.27■■□□□ 1
MLH3Q9UHC1 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21.27■■□□□ 1
MLH3Q9UHC1 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.27■■□□□ 1
MLH3Q9UHC1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MLH3Q9UHC1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MLH3Q9UHC1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.27■■□□□ 1
MLH3Q9UHC1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms