Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 MTHFR-217ENST00000641820 1569 ntBASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 SFPQP1-201ENST00000446621 1786 ntBASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC092865.2-201ENST00000439409 971 ntBASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC092127.1-201ENST00000567093 3455 ntBASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 AC103702.1-201ENST00000548801 2630 ntBASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RIMBP3Q9UFD9 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 RBP4-203ENST00000371469 814 ntTSL 5 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 IGHV7-56-201ENST00000518372 351 ntBASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AC022382.1-201ENST00000602768 336 ntBASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 AC092135.3-201ENST00000624151 1846 ntBASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RIMBP3Q9UFD9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 HLA-W-207ENST00000439514 771 ntBASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 RN7SL455P-201ENST00000580629 282 ntBASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC22.48■■□□□ 1.19
RIMBP3Q9UFD9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 RNF7-202ENST00000393000 805 ntTSL 2 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 RN7SL477P-201ENST00000488440 286 ntBASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC22.47■■□□□ 1.19
RIMBP3Q9UFD9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms