Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.32□□□□□ -0.28
NLKQ9UBE8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 AC097359.3-201ENST00000603982 1210 ntBASIC13.31□□□□□ -0.28
NLKQ9UBE8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NLKQ9UBE8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NLKQ9UBE8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 AP000845.1-201ENST00000581677 2131 ntBASIC13.3□□□□□ -0.28
NLKQ9UBE8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 AC097493.3-201ENST00000509725 367 ntBASIC13.3□□□□□ -0.28
NLKQ9UBE8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 DUX4L27-201ENST00000554796 1261 ntBASIC13.3□□□□□ -0.28
NLKQ9UBE8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 AC106028.4-201ENST00000614509 607 ntBASIC13.3□□□□□ -0.28
NLKQ9UBE8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NLKQ9UBE8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NLKQ9UBE8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms