Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC132872.1-201ENST00000566986 1195 ntBASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 AC132938.4-201ENST00000623835 848 ntBASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CUEDC1Q9NWM3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 TPM3P8-201ENST00000330554 643 ntBASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 RNA5SP486-201ENST00000515961 83 ntBASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AC138951.2-201ENST00000623455 1161 ntBASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 AL139099.5-201ENST00000635274 300 ntBASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.46□□□□□ -0.09
CUEDC1Q9NWM3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.46□□□□□ -0.1
CUEDC1Q9NWM3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 CNN2P8-201ENST00000421872 913 ntBASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.45□□□□□ -0.1
CUEDC1Q9NWM3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms