Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 TNRC18P2-201ENST00000417666 2714 ntBASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 AC018442.1-201ENST00000421439 2061 ntBASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.24■□□□□ 0.35
VAT1LQ9HCJ6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC005730.2-201ENST00000564549 1184 ntBASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC007326.2-201ENST00000624224 7579 ntBASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 AC015656.1-201ENST00000624209 3578 ntBASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAT1LQ9HCJ6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 E2F3P2-201ENST00000447755 1422 ntBASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AC018735.1-201ENST00000437208 1502 ntBASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 INTS4P1-203ENST00000641008 3683 ntBASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 MIR663B-201ENST00000408361 115 ntBASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.22■□□□□ 0.35
VAT1LQ9HCJ6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms