Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 AL136379.1-201ENST00000623471 2642 ntBASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNTNAP3Q9BZ76 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 PCGF3-213ENST00000620529 1899 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AC090820.1-201ENST00000519722 591 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AC120498.5-201ENST00000561757 299 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 MIR4683-201ENST00000579659 81 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AC007326.1-201ENST00000604539 458 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AC015912.3-201ENST00000619432 348 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 AL391256.1-201ENST00000443260 1855 ntBASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CNTNAP3Q9BZ76 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 FAM197Y6-201ENST00000420524 766 ntBASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 DPY19L2P5-201ENST00000456300 331 ntBASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms