Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL13Q99616 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL13Q99616 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.5□□□□□ -0.41
CCL13Q99616 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL13Q99616 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL13Q99616 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 MIR6805-201ENST00000615055 62 ntBASIC12.5□□□□□ -0.41
CCL13Q99616 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 AC003102.2-201ENST00000589195 1469 ntBASIC12.5□□□□□ -0.41
CCL13Q99616 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AC011840.2-201ENST00000563063 1520 ntBASIC12.5□□□□□ -0.41
CCL13Q99616 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCL13Q99616 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL13Q99616 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 AL138725.1-201ENST00000407347 1314 ntBASIC12.49□□□□□ -0.41
CCL13Q99616 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 KRT223P-202ENST00000449164 1292 ntBASIC12.49□□□□□ -0.41
CCL13Q99616 COX5BP1-201ENST00000507622 393 ntBASIC12.49□□□□□ -0.41
CCL13Q99616 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL13Q99616 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL13Q99616 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 AC106820.3-201ENST00000561653 397 ntBASIC12.49□□□□□ -0.41
CCL13Q99616 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL13Q99616 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL13Q99616 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CCL13Q99616 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL13Q99616 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL13Q99616 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CCL13Q99616 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCL13Q99616 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL13Q99616 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCL13Q99616 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL13Q99616 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms