Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AL157791.1-201ENST00000553667 1699 ntBASIC17.4■□□□□ 0.38
TRIM47Q96LD4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC098935.1-201ENST00000446057 611 ntBASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 PGAM1P5-201ENST00000548011 764 ntBASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC012044.1-201ENST00000603431 297 ntBASIC17.4■□□□□ 0.38
TRIM47Q96LD4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC126365.1-201ENST00000578585 1514 ntBASIC17.4■□□□□ 0.38
TRIM47Q96LD4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM47Q96LD4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM47Q96LD4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM47Q96LD4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TRIM47Q96LD4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM47Q96LD4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC125604.1-201ENST00000496255 707 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC019193.1-201ENST00000506678 823 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC116345.2-201ENST00000512837 523 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 IGLV3-15-201ENST00000518356 244 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 AC022616.1-201ENST00000518688 554 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 NPM1P43-201ENST00000558669 786 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 COX6A1P2-201ENST00000620597 330 ntBASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM47Q96LD4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms