Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 AC092910.1-201ENST00000482027 1129 ntBASIC13.16□□□□□ -0.3
AP3S1Q92572 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S1Q92572 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.16□□□□□ -0.3
AP3S1Q92572 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
AP3S1Q92572 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 CES1P1-201ENST00000421606 1704 ntBASIC13.16□□□□□ -0.3
AP3S1Q92572 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S1Q92572 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.15□□□□□ -0.3
AP3S1Q92572 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 AC004877.2-201ENST00000623941 599 ntBASIC13.15□□□□□ -0.3
AP3S1Q92572 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 CLK3P2-201ENST00000427566 1453 ntBASIC13.15□□□□□ -0.3
AP3S1Q92572 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
AP3S1Q92572 AL139385.1-201ENST00000611744 3272 ntBASIC13.15□□□□□ -0.3
AP3S1Q92572 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
AP3S1Q92572 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.15□□□□□ -0.3
AP3S1Q92572 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
AP3S1Q92572 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 AC215219.1-201ENST00000400706 1817 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms