Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC091114.1-201ENST00000522815 630 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 EHF-209ENST00000531728 485 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SNRPCP5-201ENST00000531775 189 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC002350.2-201ENST00000623894 1828 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CNN2P9-201ENST00000417134 909 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FAM21EP-201ENST00000417804 985 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 OR2R1P-201ENST00000441404 914 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FP325317.1-201ENST00000539936 1042 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CYP4F10P-201ENST00000589560 752 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 KRT18P33-201ENST00000398525 1043 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RPS19P7-201ENST00000455650 396 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC093300.1-201ENST00000510368 1201 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AP003717.2-201ENST00000534962 898 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 U62317.4-201ENST00000609758 448 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 LINC02199-201ENST00000506655 2702 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RPSAP61-201ENST00000412542 878 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 HNRNPA3P12-201ENST00000437410 1063 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RN7SL733P-201ENST00000582253 329 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RN7SL248P-201ENST00000615117 329 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RN7SL453P-201ENST00000620275 329 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 DLX4-206ENST00000611342 1662 ntBASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SYNE2Q8WXH0 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms