Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AC005252.2-201ENST00000624630 1141 ntBASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC140479.7-201ENST00000636301 2332 ntBASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC007686.3-201ENST00000619017 3487 ntBASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC236430.1-201ENST00000402231 743 ntBASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 AC133539.2-201ENST00000604757 467 ntBASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 FP325330.2-201ENST00000624219 5630 ntBASIC12.4□□□□□ -0.42
ZNF439Q8NDP4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
ZNF439Q8NDP4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF439Q8NDP4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms