Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
UBA52P62987 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.98□□□□□ -0.33
UBA52P62987 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.98□□□□□ -0.33
UBA52P62987 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.98□□□□□ -0.33
UBA52P62987 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 AC005562.1-201ENST00000583030 3219 ntBASIC12.98□□□□□ -0.33
UBA52P62987 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBA52P62987 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.97□□□□□ -0.33
UBA52P62987 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 MYCLP2-201ENST00000449268 967 ntBASIC12.97□□□□□ -0.33
UBA52P62987 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.97□□□□□ -0.33
UBA52P62987 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.97□□□□□ -0.33
UBA52P62987 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.97□□□□□ -0.33
UBA52P62987 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
UBA52P62987 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UBA52P62987 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.97□□□□□ -0.33
UBA52P62987 MIR6069-201ENST00000620069 79 ntBASIC12.97□□□□□ -0.33
UBA52P62987 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBA52P62987 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBA52P62987 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBA52P62987 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBA52P62987 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.96□□□□□ -0.33
UBA52P62987 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.96□□□□□ -0.33
UBA52P62987 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UBA52P62987 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
UBA52P62987 SPDYE17-201ENST00000412399 783 ntBASIC12.96□□□□□ -0.33
UBA52P62987 AC245100.5-201ENST00000452108 331 ntBASIC12.96□□□□□ -0.33
UBA52P62987 RN7SL837P-201ENST00000463010 287 ntBASIC12.96□□□□□ -0.33
UBA52P62987 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.96□□□□□ -0.33
UBA52P62987 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.96□□□□□ -0.33
UBA52P62987 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.96□□□□□ -0.33
UBA52P62987 AC061975.2-201ENST00000581722 295 ntBASIC12.96□□□□□ -0.33
UBA52P62987 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.96□□□□□ -0.33
UBA52P62987 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms