Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 FRMPD2B-201ENST00000431305 1347 ntBASIC17.4■□□□□ 0.38
PPP4CP60510 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PPP4CP60510 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PPP4CP60510 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4CP60510 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP4CP60510 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP4CP60510 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP4CP60510 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.39■□□□□ 0.37
PPP4CP60510 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 FGD5P1-202ENST00000614866 2498 ntBASIC17.39■□□□□ 0.37
PPP4CP60510 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP4CP60510 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 EEF1DP6-201ENST00000449232 372 ntBASIC17.39■□□□□ 0.37
PPP4CP60510 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP4CP60510 PHBP15-201ENST00000574228 665 ntBASIC17.39■□□□□ 0.37
PPP4CP60510 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4CP60510 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4CP60510 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4CP60510 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PPP4CP60510 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.38■□□□□ 0.37
PPP4CP60510 AC026320.2-201ENST00000434379 478 ntBASIC17.38■□□□□ 0.37
PPP4CP60510 PRKXP1-201ENST00000561423 1122 ntBASIC17.38■□□□□ 0.37
PPP4CP60510 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PPP4CP60510 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.38■□□□□ 0.37
PPP4CP60510 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.38■□□□□ 0.37
PPP4CP60510 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP4CP60510 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP4CP60510 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PPP4CP60510 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4CP60510 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.37■□□□□ 0.37
PPP4CP60510 CICP14-201ENST00000629111 2732 ntBASIC17.37■□□□□ 0.37
PPP4CP60510 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.37■□□□□ 0.37
PPP4CP60510 AGGF1P1-201ENST00000509500 2073 ntBASIC17.37■□□□□ 0.37
PPP4CP60510 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PPP4CP60510 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.37■□□□□ 0.37
PPP4CP60510 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPP4CP60510 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.37■□□□□ 0.37
PPP4CP60510 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.37■□□□□ 0.37
PPP4CP60510 SORD2P-201ENST00000558556 1069 ntBASIC17.37■□□□□ 0.37
PPP4CP60510 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.37■□□□□ 0.37
PPP4CP60510 AL109837.1-201ENST00000603272 613 ntBASIC17.37■□□□□ 0.37
PPP4CP60510 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.37■□□□□ 0.37
PPP4CP60510 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PPP4CP60510 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.37■□□□□ 0.37
PPP4CP60510 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms