Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 AC018442.1-201ENST00000421439 2061 ntBASIC13.91□□□□□ -0.18
EFNA3P52797 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 POM121L10P-201ENST00000436994 1285 ntBASIC13.91□□□□□ -0.18
EFNA3P52797 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.91□□□□□ -0.18
EFNA3P52797 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
EFNA3P52797 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.91□□□□□ -0.18
EFNA3P52797 BX088702.1-201ENST00000610784 235 ntBASIC13.91□□□□□ -0.18
EFNA3P52797 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.91□□□□□ -0.18
EFNA3P52797 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.91□□□□□ -0.18
EFNA3P52797 AC097376.2-205ENST00000610159 5334 ntBASIC13.91□□□□□ -0.18
EFNA3P52797 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
EFNA3P52797 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
EFNA3P52797 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
EFNA3P52797 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 AP002414.2-201ENST00000591780 3365 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
EFNA3P52797 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
EFNA3P52797 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 NKAIN1P1-201ENST00000435754 582 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 RNMTL1P1-201ENST00000454103 560 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 AC044849.1-201ENST00000519737 1188 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.9□□□□□ -0.18
EFNA3P52797 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.9□□□□□ -0.18
EFNA3P52797 AL022328.3-201ENST00000607943 679 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 AC006058.4-201ENST00000624016 1670 ntBASIC13.9□□□□□ -0.18
EFNA3P52797 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms