Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 AC015909.5-201ENST00000624336 2266 ntBASIC11.84□□□□□ -0.51
CDC34P49427 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CDC34P49427 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC34P49427 FAM210CP-201ENST00000445714 574 ntBASIC11.84□□□□□ -0.51
CDC34P49427 EMBP1-201ENST00000458200 901 ntBASIC11.84□□□□□ -0.51
CDC34P49427 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.84□□□□□ -0.51
CDC34P49427 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
CDC34P49427 KRT18P35-201ENST00000510488 1269 ntBASIC11.84□□□□□ -0.51
CDC34P49427 IGHV3-22-201ENST00000520721 359 ntBASIC11.84□□□□□ -0.51
CDC34P49427 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.84□□□□□ -0.51
CDC34P49427 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.84□□□□□ -0.51
CDC34P49427 SAMD11P1-201ENST00000571429 661 ntBASIC11.84□□□□□ -0.51
CDC34P49427 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.84□□□□□ -0.51
CDC34P49427 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.84□□□□□ -0.51
CDC34P49427 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.84□□□□□ -0.51
CDC34P49427 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.84□□□□□ -0.51
CDC34P49427 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC34P49427 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CDC34P49427 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC34P49427 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC34P49427 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC34P49427 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CDC34P49427 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CDC34P49427 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CDC34P49427 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
CDC34P49427 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CDC34P49427 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.83□□□□□ -0.52
CDC34P49427 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.83□□□□□ -0.52
CDC34P49427 KRT8P23-201ENST00000560090 1207 ntBASIC11.83□□□□□ -0.52
CDC34P49427 RARRES2P9-201ENST00000565168 469 ntBASIC11.83□□□□□ -0.52
CDC34P49427 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.83□□□□□ -0.52
CDC34P49427 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CDC34P49427 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AC074044.1-201ENST00000609673 707 ntBASIC11.83□□□□□ -0.52
CDC34P49427 AC012313.10-201ENST00000623509 926 ntBASIC11.83□□□□□ -0.52
CDC34P49427 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms