Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSNK1DP48730 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSNK1DP48730 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSNK1DP48730 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1DP48730 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CSNK1DP48730 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CSNK1DP48730 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1DP48730 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.83□□□□□ -0.03
CSNK1DP48730 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1DP48730 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CSNK1DP48730 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1DP48730 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1DP48730 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.83□□□□□ -0.04
CSNK1DP48730 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1DP48730 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSNK1DP48730 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.83□□□□□ -0.04
CSNK1DP48730 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 RN7SL163P-201ENST00000583100 276 ntBASIC14.83□□□□□ -0.04
CSNK1DP48730 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
CSNK1DP48730 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1DP48730 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1DP48730 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.83□□□□□ -0.04
CSNK1DP48730 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CSNK1DP48730 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.83□□□□□ -0.04
CSNK1DP48730 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1DP48730 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSNK1DP48730 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CSNK1DP48730 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CSNK1DP48730 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 DPM3-202ENST00000368399 517 ntBASIC14.82□□□□□ -0.04
CSNK1DP48730 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSNK1DP48730 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.82□□□□□ -0.04
CSNK1DP48730 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 AL160314.3-201ENST00000556041 767 ntBASIC14.82□□□□□ -0.04
CSNK1DP48730 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 AC004923.1-202ENST00000642106 209 ntBASIC14.82□□□□□ -0.04
CSNK1DP48730 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CSNK1DP48730 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 AC068418.2-201ENST00000577309 3703 ntBASIC14.82□□□□□ -0.04
CSNK1DP48730 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.82□□□□□ -0.04
CSNK1DP48730 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CSNK1DP48730 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1DP48730 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1DP48730 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms