Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC9.73□□□□□ -0.85
PCP4P48539 KRBA1-207ENST00000496259 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC9.73□□□□□ -0.85
PCP4P48539 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 SMUG1P1-201ENST00000590640 811 ntBASIC9.73□□□□□ -0.85
PCP4P48539 NKILA-201ENST00000613231 537 ntTSL 4 BASIC9.73□□□□□ -0.85
PCP4P48539 PGM5P2-202ENST00000637225 1043 ntBASIC9.73□□□□□ -0.85
PCP4P48539 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 CES5A-204ENST00000520435 1948 ntTSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
PCP4P48539 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
PCP4P48539 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
PCP4P48539 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC9.73□□□□□ -0.85
PCP4P48539 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 HSH2D-208ENST00000616645 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
PCP4P48539 WASH3P-207ENST00000560956 1394 ntBASIC9.73□□□□□ -0.85
PCP4P48539 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 FO538757.1-201ENST00000623083 1397 ntBASIC9.73□□□□□ -0.85
PCP4P48539 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC9.73□□□□□ -0.85
PCP4P48539 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 KRT8P7-201ENST00000533003 1432 ntBASIC9.73□□□□□ -0.85
PCP4P48539 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PCP4P48539 GJB6-201ENST00000241124 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 STX4-202ENST00000394998 1498 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 NEFL-201ENST00000610854 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 HAP1-203ENST00000347901 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 INPP5K-203ENST00000406424 3194 ntTSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 TACC2-204ENST00000360561 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 MGAT5B-203ENST00000428789 4053 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ABCG1-202ENST00000347800 2923 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 DDX43P3-201ENST00000441064 443 ntBASIC9.72□□□□□ -0.85
PCP4P48539 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.72□□□□□ -0.85
PCP4P48539 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC9.72□□□□□ -0.85
PCP4P48539 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 OR13A1-201ENST00000374401 2574 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
PCP4P48539 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
PCP4P48539 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 IRF5-203ENST00000402030 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 CDH4-202ENST00000611855 3304 ntTSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
PCP4P48539 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC9.72□□□□□ -0.85
PCP4P48539 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 AC012313.5-201ENST00000594816 2517 ntBASIC9.72□□□□□ -0.85
PCP4P48539 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PCP4P48539 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PCP4P48539 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
PCP4P48539 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PCP4P48539 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms