RNA–Protein interactions for RNA: ENST00000616645.4

HSH2D-208, Transcript of hematopoietic SH2 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSH2D, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSH2D-208ENST00000616645 NISCHQ9Y2I1 1504 aa22.42■■□□□ 1.18
HSH2D-208ENST00000616645 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
HSH2D-208ENST00000616645 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
HSH2D-208ENST00000616645 ABCC9O60706 1549 aa19.1■□□□□ 0.65
HSH2D-208ENST00000616645 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
HSH2D-208ENST00000616645 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
HSH2D-208ENST00000616645 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
HSH2D-208ENST00000616645 NACADO15069 1562 aa18.41■□□□□ 0.54
HSH2D-208ENST00000616645 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
HSH2D-208ENST00000616645 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
HSH2D-208ENST00000616645 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
HSH2D-208ENST00000616645 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
HSH2D-208ENST00000616645 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
HSH2D-208ENST00000616645 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
HSH2D-208ENST00000616645 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
HSH2D-208ENST00000616645 UNC13AQ9UPW8 1703 aa17.94■□□□□ 0.46
HSH2D-208ENST00000616645 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
HSH2D-208ENST00000616645 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
HSH2D-208ENST00000616645 HRCP23327 699 aa17.77■□□□□ 0.44
HSH2D-208ENST00000616645 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.43
HSH2D-208ENST00000616645 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
HSH2D-208ENST00000616645 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
HSH2D-208ENST00000616645 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
HSH2D-208ENST00000616645 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
HSH2D-208ENST00000616645 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
HSH2D-208ENST00000616645 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
HSH2D-208ENST00000616645 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
HSH2D-208ENST00000616645 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
HSH2D-208ENST00000616645 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
HSH2D-208ENST00000616645 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
HSH2D-208ENST00000616645 WIZO95785 1651 aa17.21■□□□□ 0.35
HSH2D-208ENST00000616645 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
HSH2D-208ENST00000616645 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
HSH2D-208ENST00000616645 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
HSH2D-208ENST00000616645 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
HSH2D-208ENST00000616645 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
HSH2D-208ENST00000616645 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
HSH2D-208ENST00000616645 MYT1Q01538 1121 aa17.1■□□□□ 0.33
HSH2D-208ENST00000616645 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
HSH2D-208ENST00000616645 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
HSH2D-208ENST00000616645 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
HSH2D-208ENST00000616645 NCAPD3P42695 1498 aa17■□□□□ 0.31
HSH2D-208ENST00000616645 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.31
HSH2D-208ENST00000616645 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
HSH2D-208ENST00000616645 RTN4Q9NQC3 1192 aaKnown RBP16.85■□□□□ 0.29
HSH2D-208ENST00000616645 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
HSH2D-208ENST00000616645 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
HSH2D-208ENST00000616645 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
HSH2D-208ENST00000616645 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
HSH2D-208ENST00000616645 NESP48681 1621 aa16.62■□□□□ 0.25
HSH2D-208ENST00000616645 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
HSH2D-208ENST00000616645 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
HSH2D-208ENST00000616645 KCNA4P22459 653 aa16.59■□□□□ 0.25
HSH2D-208ENST00000616645 CFTRP13569 1480 aa16.55■□□□□ 0.24
HSH2D-208ENST00000616645 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
HSH2D-208ENST00000616645 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
HSH2D-208ENST00000616645 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.22
HSH2D-208ENST00000616645 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
HSH2D-208ENST00000616645 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
HSH2D-208ENST00000616645 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
HSH2D-208ENST00000616645 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
HSH2D-208ENST00000616645 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
HSH2D-208ENST00000616645 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
HSH2D-208ENST00000616645 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
HSH2D-208ENST00000616645 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
HSH2D-208ENST00000616645 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
HSH2D-208ENST00000616645 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
HSH2D-208ENST00000616645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
HSH2D-208ENST00000616645 NEUROD1Q13562 356 aa16.29■□□□□ 0.2
HSH2D-208ENST00000616645 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
HSH2D-208ENST00000616645 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
HSH2D-208ENST00000616645 CUX1P39880 1505 aa16.23■□□□□ 0.19
HSH2D-208ENST00000616645 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
HSH2D-208ENST00000616645 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
HSH2D-208ENST00000616645 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
HSH2D-208ENST00000616645 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
HSH2D-208ENST00000616645 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
HSH2D-208ENST00000616645 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
HSH2D-208ENST00000616645 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
HSH2D-208ENST00000616645 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
HSH2D-208ENST00000616645 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
HSH2D-208ENST00000616645 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
HSH2D-208ENST00000616645 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
HSH2D-208ENST00000616645 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
HSH2D-208ENST00000616645 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
HSH2D-208ENST00000616645 SOGA1O94964 1423 aa16.11■□□□□ 0.17
HSH2D-208ENST00000616645 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
HSH2D-208ENST00000616645 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
HSH2D-208ENST00000616645 WDR62O43379 1518 aa16.1■□□□□ 0.17
HSH2D-208ENST00000616645 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
HSH2D-208ENST00000616645 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
HSH2D-208ENST00000616645 CUX2O14529 1486 aa16.02■□□□□ 0.16
HSH2D-208ENST00000616645 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
HSH2D-208ENST00000616645 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
HSH2D-208ENST00000616645 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
HSH2D-208ENST00000616645 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
HSH2D-208ENST00000616645 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
HSH2D-208ENST00000616645 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
HSH2D-208ENST00000616645 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
HSH2D-208ENST00000616645 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms