RNA–Protein interactions for RNA: ENST00000321764.3

CA13-201, Transcript of carbonic anhydrase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA13, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA13-201ENST00000321764 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
CA13-201ENST00000321764 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
CA13-201ENST00000321764 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
CA13-201ENST00000321764 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
CA13-201ENST00000321764 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
CA13-201ENST00000321764 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
CA13-201ENST00000321764 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
CA13-201ENST00000321764 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
CA13-201ENST00000321764 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
CA13-201ENST00000321764 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
CA13-201ENST00000321764 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
CA13-201ENST00000321764 HRCP23327 699 aa18.98■□□□□ 0.63
CA13-201ENST00000321764 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
CA13-201ENST00000321764 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
CA13-201ENST00000321764 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
CA13-201ENST00000321764 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
CA13-201ENST00000321764 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
CA13-201ENST00000321764 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
CA13-201ENST00000321764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
CA13-201ENST00000321764 ABCC9O60706 1549 aa18.36■□□□□ 0.53
CA13-201ENST00000321764 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.52
CA13-201ENST00000321764 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
CA13-201ENST00000321764 YTHDC1Q96MU7 727 aaKnown RBP18.2■□□□□ 0.5
CA13-201ENST00000321764 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
CA13-201ENST00000321764 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
CA13-201ENST00000321764 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
CA13-201ENST00000321764 APLP2Q06481 763 aa18.08■□□□□ 0.49
CA13-201ENST00000321764 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
CA13-201ENST00000321764 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
CA13-201ENST00000321764 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
CA13-201ENST00000321764 ITGAEP38570 1179 aa17.88■□□□□ 0.45
CA13-201ENST00000321764 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
CA13-201ENST00000321764 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
CA13-201ENST00000321764 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.44
CA13-201ENST00000321764 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
CA13-201ENST00000321764 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
CA13-201ENST00000321764 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
CA13-201ENST00000321764 GTF3C3Q9Y5Q9 886 aa17.7■□□□□ 0.42
CA13-201ENST00000321764 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
CA13-201ENST00000321764 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
CA13-201ENST00000321764 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
CA13-201ENST00000321764 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
CA13-201ENST00000321764 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
CA13-201ENST00000321764 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
CA13-201ENST00000321764 SOGA1O94964 1423 aa17.43■□□□□ 0.38
CA13-201ENST00000321764 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
CA13-201ENST00000321764 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
CA13-201ENST00000321764 CEP162Q5TB80 1403 aa17.39■□□□□ 0.37
CA13-201ENST00000321764 WIZO95785 1651 aa17.37■□□□□ 0.37
CA13-201ENST00000321764 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
CA13-201ENST00000321764 MIER1Q8N108 512 aa17.35■□□□□ 0.37
CA13-201ENST00000321764 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
CA13-201ENST00000321764 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
CA13-201ENST00000321764 BCANQ96GW7 911 aa17.29■□□□□ 0.36
CA13-201ENST00000321764 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
CA13-201ENST00000321764 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
CA13-201ENST00000321764 NACADO15069 1562 aa17.19■□□□□ 0.34
CA13-201ENST00000321764 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
CA13-201ENST00000321764 CLIP1P30622 1438 aa17.18■□□□□ 0.34
CA13-201ENST00000321764 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
CA13-201ENST00000321764 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
CA13-201ENST00000321764 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
CA13-201ENST00000321764 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
CA13-201ENST00000321764 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
CA13-201ENST00000321764 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
CA13-201ENST00000321764 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
CA13-201ENST00000321764 NEFLP07196 543 aa17■□□□□ 0.31
CA13-201ENST00000321764 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
CA13-201ENST00000321764 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
CA13-201ENST00000321764 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
CA13-201ENST00000321764 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
CA13-201ENST00000321764 EEA1Q15075 1411 aa16.87■□□□□ 0.29
CA13-201ENST00000321764 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
CA13-201ENST00000321764 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
CA13-201ENST00000321764 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
CA13-201ENST00000321764 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
CA13-201ENST00000321764 FKBP8Q14318 412 aa16.84■□□□□ 0.29
CA13-201ENST00000321764 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
CA13-201ENST00000321764 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
CA13-201ENST00000321764 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
CA13-201ENST00000321764 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
CA13-201ENST00000321764 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
CA13-201ENST00000321764 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
CA13-201ENST00000321764 ANP32CO43423 234 aa16.77■□□□□ 0.28
CA13-201ENST00000321764 MYT1Q01538 1121 aa16.77■□□□□ 0.28
CA13-201ENST00000321764 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
CA13-201ENST00000321764 FBLN2P98095 1184 aa16.71■□□□□ 0.27
CA13-201ENST00000321764 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
CA13-201ENST00000321764 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
CA13-201ENST00000321764 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
CA13-201ENST00000321764 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CA13-201ENST00000321764 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
CA13-201ENST00000321764 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
CA13-201ENST00000321764 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
CA13-201ENST00000321764 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
CA13-201ENST00000321764 CUX2O14529 1486 aa16.61■□□□□ 0.25
CA13-201ENST00000321764 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
CA13-201ENST00000321764 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
CA13-201ENST00000321764 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
CA13-201ENST00000321764 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms