RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
CDH4-202ENST00000611855 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.64
CDH4-202ENST00000611855 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
CDH4-202ENST00000611855 HRCP23327 699 aa18.51■□□□□ 0.55
CDH4-202ENST00000611855 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
CDH4-202ENST00000611855 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
CDH4-202ENST00000611855 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
CDH4-202ENST00000611855 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
CDH4-202ENST00000611855 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
CDH4-202ENST00000611855 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
CDH4-202ENST00000611855 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
CDH4-202ENST00000611855 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
CDH4-202ENST00000611855 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
CDH4-202ENST00000611855 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
CDH4-202ENST00000611855 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
CDH4-202ENST00000611855 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
CDH4-202ENST00000611855 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
CDH4-202ENST00000611855 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
CDH4-202ENST00000611855 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
CDH4-202ENST00000611855 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
CDH4-202ENST00000611855 ABCC9O60706 1549 aa17.17■□□□□ 0.34
CDH4-202ENST00000611855 MYT1Q01538 1121 aa17.17■□□□□ 0.34
CDH4-202ENST00000611855 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
CDH4-202ENST00000611855 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
CDH4-202ENST00000611855 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
CDH4-202ENST00000611855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
CDH4-202ENST00000611855 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
CDH4-202ENST00000611855 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
CDH4-202ENST00000611855 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
CDH4-202ENST00000611855 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
CDH4-202ENST00000611855 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
CDH4-202ENST00000611855 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
CDH4-202ENST00000611855 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
CDH4-202ENST00000611855 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
CDH4-202ENST00000611855 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
CDH4-202ENST00000611855 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.26
CDH4-202ENST00000611855 WIZO95785 1651 aa16.59■□□□□ 0.25
CDH4-202ENST00000611855 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
CDH4-202ENST00000611855 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
CDH4-202ENST00000611855 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
CDH4-202ENST00000611855 MIER1Q8N108 512 aa16.5■□□□□ 0.23
CDH4-202ENST00000611855 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
CDH4-202ENST00000611855 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
CDH4-202ENST00000611855 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
CDH4-202ENST00000611855 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDH4-202ENST00000611855 SOGA1O94964 1423 aa16.44■□□□□ 0.22
CDH4-202ENST00000611855 NACADO15069 1562 aa16.43■□□□□ 0.22
CDH4-202ENST00000611855 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
CDH4-202ENST00000611855 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
CDH4-202ENST00000611855 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
CDH4-202ENST00000611855 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
CDH4-202ENST00000611855 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
CDH4-202ENST00000611855 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
CDH4-202ENST00000611855 BCL11AQ9H165 835 aa16.3■□□□□ 0.2
CDH4-202ENST00000611855 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
CDH4-202ENST00000611855 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
CDH4-202ENST00000611855 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
CDH4-202ENST00000611855 APLP2Q06481 763 aa16.17■□□□□ 0.18
CDH4-202ENST00000611855 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
CDH4-202ENST00000611855 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
CDH4-202ENST00000611855 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
CDH4-202ENST00000611855 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
CDH4-202ENST00000611855 BCANQ96GW7 911 aa16.11■□□□□ 0.17
CDH4-202ENST00000611855 CLIP1P30622 1438 aa16.09■□□□□ 0.17
CDH4-202ENST00000611855 EEA1Q15075 1411 aa16.05■□□□□ 0.16
CDH4-202ENST00000611855 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
CDH4-202ENST00000611855 ITGAEP38570 1179 aa16.01■□□□□ 0.15
CDH4-202ENST00000611855 KCNH8Q96L42 1107 aa16■□□□□ 0.15
CDH4-202ENST00000611855 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
CDH4-202ENST00000611855 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
CDH4-202ENST00000611855 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
CDH4-202ENST00000611855 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
CDH4-202ENST00000611855 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
CDH4-202ENST00000611855 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
CDH4-202ENST00000611855 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
CDH4-202ENST00000611855 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
CDH4-202ENST00000611855 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
CDH4-202ENST00000611855 FKBP8Q14318 412 aa15.86■□□□□ 0.13
CDH4-202ENST00000611855 KIF21BO75037 1637 aa15.86■□□□□ 0.13
CDH4-202ENST00000611855 HIRIP3Q9BW71 556 aaPredicted RBP15.8■□□□□ 0.12
CDH4-202ENST00000611855 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
CDH4-202ENST00000611855 RBM19Q9Y4C8 960 aaKnown RBP15.78■□□□□ 0.12
CDH4-202ENST00000611855 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
CDH4-202ENST00000611855 NEFLP07196 543 aa15.72■□□□□ 0.11
CDH4-202ENST00000611855 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
CDH4-202ENST00000611855 SIN3AQ96ST3 1273 aa15.71■□□□□ 0.11
CDH4-202ENST00000611855 ARAP1Q96P48 1450 aa15.71■□□□□ 0.11
CDH4-202ENST00000611855 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
CDH4-202ENST00000611855 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
CDH4-202ENST00000611855 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
CDH4-202ENST00000611855 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
CDH4-202ENST00000611855 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
CDH4-202ENST00000611855 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
CDH4-202ENST00000611855 MSH5O43196 834 aa15.62■□□□□ 0.09
CDH4-202ENST00000611855 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
CDH4-202ENST00000611855 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
CDH4-202ENST00000611855 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
CDH4-202ENST00000611855 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
CDH4-202ENST00000611855 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
CDH4-202ENST00000611855 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms