RNA–Protein interactions for RNA: ENST00000526508.5

ATG13-207, Transcript of autophagy related 13, humanhuman

TSL 5 BASIC

Gene ATG13, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-207ENST00000526508 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
ATG13-207ENST00000526508 MYT1Q01538 1121 aa17.12■□□□□ 0.33
ATG13-207ENST00000526508 HRCP23327 699 aa16.36■□□□□ 0.21
ATG13-207ENST00000526508 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
ATG13-207ENST00000526508 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
ATG13-207ENST00000526508 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
ATG13-207ENST00000526508 TTBK1Q5TCY1 1321 aaPredicted RBP15.96■□□□□ 0.15
ATG13-207ENST00000526508 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
ATG13-207ENST00000526508 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
ATG13-207ENST00000526508 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
ATG13-207ENST00000526508 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
ATG13-207ENST00000526508 GTF3C3Q9Y5Q9 886 aa15.49■□□□□ 0.07
ATG13-207ENST00000526508 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
ATG13-207ENST00000526508 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
ATG13-207ENST00000526508 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
ATG13-207ENST00000526508 YTHDC1Q96MU7 727 aaKnown RBP15.34■□□□□ 0.05
ATG13-207ENST00000526508 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
ATG13-207ENST00000526508 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
ATG13-207ENST00000526508 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
ATG13-207ENST00000526508 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
ATG13-207ENST00000526508 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
ATG13-207ENST00000526508 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
ATG13-207ENST00000526508 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
ATG13-207ENST00000526508 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
ATG13-207ENST00000526508 ANP32EQ9BTT0 268 aa14.96□□□□□ -0.01
ATG13-207ENST00000526508 NEFLP07196 543 aa14.94□□□□□ -0.02
ATG13-207ENST00000526508 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
ATG13-207ENST00000526508 PRKCSHP14314 528 aaPredicted RBP14.78□□□□□ -0.04
ATG13-207ENST00000526508 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
ATG13-207ENST00000526508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
ATG13-207ENST00000526508 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
ATG13-207ENST00000526508 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
ATG13-207ENST00000526508 MYT1LQ9UL68 1186 aa14.67□□□□□ -0.06
ATG13-207ENST00000526508 RTL5Q5HYW3 569 aaPredicted RBP14.65□□□□□ -0.06
ATG13-207ENST00000526508 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
ATG13-207ENST00000526508 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
ATG13-207ENST00000526508 BCANQ96GW7 911 aa14.61□□□□□ -0.07
ATG13-207ENST00000526508 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
ATG13-207ENST00000526508 EIF5BO60841 1220 aaKnown RBP14.52□□□□□ -0.09
ATG13-207ENST00000526508 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
ATG13-207ENST00000526508 APLP2Q06481 763 aa14.43□□□□□ -0.1
ATG13-207ENST00000526508 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
ATG13-207ENST00000526508 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
ATG13-207ENST00000526508 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
ATG13-207ENST00000526508 MIER1Q8N108 512 aa14.36□□□□□ -0.11
ATG13-207ENST00000526508 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
ATG13-207ENST00000526508 FKBP8Q14318 412 aa14.34□□□□□ -0.11
ATG13-207ENST00000526508 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
ATG13-207ENST00000526508 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
ATG13-207ENST00000526508 NBR1Q14596 966 aa14.24□□□□□ -0.13
ATG13-207ENST00000526508 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.14
ATG13-207ENST00000526508 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
ATG13-207ENST00000526508 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
ATG13-207ENST00000526508 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
ATG13-207ENST00000526508 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
ATG13-207ENST00000526508 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
ATG13-207ENST00000526508 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
ATG13-207ENST00000526508 ITGAEP38570 1179 aa14.12□□□□□ -0.15
ATG13-207ENST00000526508 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
ATG13-207ENST00000526508 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
ATG13-207ENST00000526508 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
ATG13-207ENST00000526508 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.16
ATG13-207ENST00000526508 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
ATG13-207ENST00000526508 ANP32CO43423 234 aa13.96□□□□□ -0.18
ATG13-207ENST00000526508 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
ATG13-207ENST00000526508 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
ATG13-207ENST00000526508 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
ATG13-207ENST00000526508 NEFMP07197 916 aa13.87□□□□□ -0.19
ATG13-207ENST00000526508 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
ATG13-207ENST00000526508 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
ATG13-207ENST00000526508 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
ATG13-207ENST00000526508 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
ATG13-207ENST00000526508 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
ATG13-207ENST00000526508 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
ATG13-207ENST00000526508 IRX6P78412 446 aaPredicted RBP13.8□□□□□ -0.2
ATG13-207ENST00000526508 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATG13-207ENST00000526508 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
ATG13-207ENST00000526508 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
ATG13-207ENST00000526508 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
ATG13-207ENST00000526508 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
ATG13-207ENST00000526508 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
ATG13-207ENST00000526508 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
ATG13-207ENST00000526508 NAP1L5Q96NT1 182 aaPredicted RBP13.68□□□□□ -0.22
ATG13-207ENST00000526508 LAS1LQ9Y4W2 734 aaKnown RBP13.67□□□□□ -0.22
ATG13-207ENST00000526508 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
ATG13-207ENST00000526508 ABCC9O60706 1549 aa13.63□□□□□ -0.23
ATG13-207ENST00000526508 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
ATG13-207ENST00000526508 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
ATG13-207ENST00000526508 MSH5O43196 834 aa13.59□□□□□ -0.23
ATG13-207ENST00000526508 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
ATG13-207ENST00000526508 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
ATG13-207ENST00000526508 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
ATG13-207ENST00000526508 B4GALNT3Q6L9W6 998 aa13.56□□□□□ -0.24
ATG13-207ENST00000526508 USP35Q9P2H5 1018 aa13.56□□□□□ -0.24
ATG13-207ENST00000526508 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
ATG13-207ENST00000526508 ARXQ96QS3 562 aa13.53□□□□□ -0.24
ATG13-207ENST00000526508 A0A0U1RQG5 324 aaPredicted RBP13.53□□□□□ -0.24
ATG13-207ENST00000526508 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
ATG13-207ENST00000526508 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
ATG13-207ENST00000526508 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms