Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD4P46934 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.44■□□□□ 0.38
NEDD4P46934 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD4P46934 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD4P46934 AL162426.1-201ENST00000624141 743 ntBASIC17.44■□□□□ 0.38
NEDD4P46934 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 KHSRPP1-201ENST00000427983 1768 ntBASIC17.43■□□□□ 0.38
NEDD4P46934 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 ACTBP11-201ENST00000436287 1126 ntBASIC17.43■□□□□ 0.38
NEDD4P46934 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 AC092658.1-201ENST00000505836 891 ntBASIC17.43■□□□□ 0.38
NEDD4P46934 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.43■□□□□ 0.38
NEDD4P46934 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 DUX4L46-201ENST00000566845 751 ntBASIC17.43■□□□□ 0.38
NEDD4P46934 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.43■□□□□ 0.38
NEDD4P46934 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD4P46934 AC244394.1-201ENST00000435000 1665 ntBASIC17.43■□□□□ 0.38
NEDD4P46934 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NEDD4P46934 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEDD4P46934 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.42■□□□□ 0.38
NEDD4P46934 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 BRWD1P1-201ENST00000401091 371 ntBASIC17.42■□□□□ 0.38
NEDD4P46934 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.42■□□□□ 0.38
NEDD4P46934 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD4P46934 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD4P46934 MIR4538-201ENST00000581377 78 ntBASIC17.42■□□□□ 0.38
NEDD4P46934 AC091271.1-201ENST00000611877 1162 ntBASIC17.42■□□□□ 0.38
NEDD4P46934 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NEDD4P46934 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD4P46934 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms