Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
COL8A2P25067 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.58□□□□□ -0.4
COL8A2P25067 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.58□□□□□ -0.4
COL8A2P25067 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 AC004898.1-201ENST00000451057 766 ntBASIC12.58□□□□□ -0.4
COL8A2P25067 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 AC005730.2-201ENST00000564549 1184 ntBASIC12.58□□□□□ -0.4
COL8A2P25067 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
COL8A2P25067 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 CICP23-201ENST00000605013 2741 ntBASIC12.58□□□□□ -0.4
COL8A2P25067 LINC00552-201ENST00000625151 2579 ntBASIC12.58□□□□□ -0.4
COL8A2P25067 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
COL8A2P25067 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
COL8A2P25067 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COL8A2P25067 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COL8A2P25067 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.57□□□□□ -0.4
COL8A2P25067 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 SALL4P5-201ENST00000419001 1760 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
COL8A2P25067 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COL8A2P25067 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.57□□□□□ -0.4
COL8A2P25067 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.57□□□□□ -0.4
COL8A2P25067 BCYRN1-201ENST00000418539 200 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 AL354877.1-201ENST00000424412 413 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 FNTAP2-201ENST00000430308 634 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.57□□□□□ -0.4
COL8A2P25067 AC126915.1-201ENST00000522847 1038 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.57□□□□□ -0.4
COL8A2P25067 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 AL451050.2-201ENST00000606967 682 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 AC244452.3-201ENST00000636814 210 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 AC003102.2-201ENST00000589195 1469 ntBASIC12.57□□□□□ -0.4
COL8A2P25067 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
COL8A2P25067 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
COL8A2P25067 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.57□□□□□ -0.4
COL8A2P25067 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COL8A2P25067 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms