Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCFC2P16383 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.8■□□□□ 0.28
GCFC2P16383 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GCFC2P16383 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCFC2P16383 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
GCFC2P16383 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GCFC2P16383 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCFC2P16383 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCFC2P16383 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.8■□□□□ 0.28
GCFC2P16383 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.79■□□□□ 0.28
GCFC2P16383 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.79■□□□□ 0.28
GCFC2P16383 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.79■□□□□ 0.28
GCFC2P16383 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.79■□□□□ 0.28
GCFC2P16383 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.79■□□□□ 0.28
GCFC2P16383 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.79■□□□□ 0.28
GCFC2P16383 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.79■□□□□ 0.28
GCFC2P16383 MIR4741-201ENST00000579822 90 ntBASIC16.79■□□□□ 0.28
GCFC2P16383 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.79■□□□□ 0.28
GCFC2P16383 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 AC139712.1-201ENST00000378256 1875 ntBASIC16.79■□□□□ 0.28
GCFC2P16383 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 AC015818.8-201ENST00000587907 1519 ntBASIC16.79■□□□□ 0.28
GCFC2P16383 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
GCFC2P16383 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
GCFC2P16383 AGGF1P1-201ENST00000509500 2073 ntBASIC16.79■□□□□ 0.28
GCFC2P16383 AC232323.1-201ENST00000540724 2099 ntBASIC16.79■□□□□ 0.28
GCFC2P16383 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.79■□□□□ 0.28
GCFC2P16383 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCFC2P16383 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.78■□□□□ 0.28
GCFC2P16383 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 TUBB1P2-201ENST00000422712 1306 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 TUBB1P1-201ENST00000503144 1300 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GCFC2P16383 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GCFC2P16383 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.78■□□□□ 0.28
GCFC2P16383 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 RPS2P32-201ENST00000439199 892 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 Z93015.1-201ENST00000451718 390 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 AC022447.6-201ENST00000515522 438 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.78■□□□□ 0.28
GCFC2P16383 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.78■□□□□ 0.28
GCFC2P16383 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.78■□□□□ 0.28
GCFC2P16383 AL583810.1-201ENST00000553344 1045 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.78■□□□□ 0.28
GCFC2P16383 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 AL008721.1-201ENST00000609964 604 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 AC009542.2-202ENST00000619004 1067 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 AL137784.3-201ENST00000623858 2288 ntBASIC16.78■□□□□ 0.28
GCFC2P16383 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.78■□□□□ 0.28
GCFC2P16383 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GCFC2P16383 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCFC2P16383 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms