Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
TPM2P07951 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 FTO-214ENST00000636218 2227 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 CETN4P-206ENST00000642099 2168 ntBASIC17.05■□□□□ 0.32
TPM2P07951 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 SPDYE14P-201ENST00000442619 822 ntBASIC17.05■□□□□ 0.32
TPM2P07951 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.05■□□□□ 0.32
TPM2P07951 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 AL589739.1-201ENST00000607720 493 ntBASIC17.05■□□□□ 0.32
TPM2P07951 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TPM2P07951 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM2P07951 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TPM2P07951 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM2P07951 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM2P07951 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM2P07951 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM2P07951 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM2P07951 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM2P07951 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM2P07951 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM2P07951 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM2P07951 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM2P07951 YBX1P5-201ENST00000509441 847 ntBASIC17.04■□□□□ 0.32
TPM2P07951 AL079307.3-201ENST00000556114 283 ntBASIC17.04■□□□□ 0.32
TPM2P07951 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM2P07951 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM2P07951 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM2P07951 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM2P07951 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.04■□□□□ 0.32
TPM2P07951 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM2P07951 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM2P07951 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM2P07951 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM2P07951 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM2P07951 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TPM2P07951 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM2P07951 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM2P07951 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms