Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
MT-ND3P03897 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND3P03897 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-ND3P03897 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.27■□□□□ 0.03
MT-ND3P03897 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND3P03897 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.27■□□□□ 0.03
MT-ND3P03897 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND3P03897 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.27■□□□□ 0.03
MT-ND3P03897 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND3P03897 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND3P03897 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.26■□□□□ 0.03
MT-ND3P03897 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MT-ND3P03897 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND3P03897 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
MT-ND3P03897 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.26■□□□□ 0.03
MT-ND3P03897 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MT-ND3P03897 OR8S1-201ENST00000310194 1080 ntBASIC15.26■□□□□ 0.03
MT-ND3P03897 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MT-ND3P03897 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
MT-ND3P03897 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND3P03897 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
MT-ND3P03897 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MT-ND3P03897 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND3P03897 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND3P03897 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 AC018665.1-201ENST00000622927 1362 ntBASIC15.25■□□□□ 0.03
MT-ND3P03897 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 AL360270.3-201ENST00000609118 1348 ntBASIC15.25■□□□□ 0.03
MT-ND3P03897 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MT-ND3P03897 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 TOMM22P5-201ENST00000416399 439 ntBASIC15.25■□□□□ 0.03
MT-ND3P03897 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-ND3P03897 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 SRD5A3P1-201ENST00000603021 949 ntBASIC15.25■□□□□ 0.03
MT-ND3P03897 LINC01115-203ENST00000606068 577 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms