Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EXTL3O43909 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
EXTL3O43909 SHC1P1-201ENST00000425230 1745 ntBASIC16.11■□□□□ 0.17
EXTL3O43909 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EXTL3O43909 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.11■□□□□ 0.17
EXTL3O43909 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
EXTL3O43909 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 AL590440.2-201ENST00000641973 1595 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 AC099063.4-201ENST00000641099 1602 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 BRWD1P1-201ENST00000401091 371 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 TPT1P11-201ENST00000458482 498 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.1■□□□□ 0.17
EXTL3O43909 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 AC022447.6-201ENST00000515522 438 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
EXTL3O43909 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 AC007686.3-201ENST00000619017 3487 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EXTL3O43909 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 AC139712.1-201ENST00000378256 1875 ntBASIC16.1■□□□□ 0.17
EXTL3O43909 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EXTL3O43909 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EXTL3O43909 AC015818.8-201ENST00000587907 1519 ntBASIC16.09■□□□□ 0.17
EXTL3O43909 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
EXTL3O43909 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EXTL3O43909 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 AC015688.4-201ENST00000580780 1647 ntBASIC16.09■□□□□ 0.17
EXTL3O43909 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 INTS4P1-203ENST00000641008 3683 ntBASIC16.09■□□□□ 0.17
EXTL3O43909 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.09■□□□□ 0.17
EXTL3O43909 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 RN7SL560P-201ENST00000577943 264 ntBASIC16.09■□□□□ 0.17
EXTL3O43909 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EXTL3O43909 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
EXTL3O43909 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EXTL3O43909 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EXTL3O43909 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
EXTL3O43909 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EXTL3O43909 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EXTL3O43909 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EXTL3O43909 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
EXTL3O43909 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
EXTL3O43909 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
EXTL3O43909 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EXTL3O43909 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EXTL3O43909 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.08■□□□□ 0.16
EXTL3O43909 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms