Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 HLA-K-203ENST00000430151 1046 ntBASIC12.78□□□□□ -0.36
TMEM235A6NFC5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AL512361.1-201ENST00000554200 418 ntBASIC12.78□□□□□ -0.36
TMEM235A6NFC5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AL109936.8-201ENST00000641772 604 ntBASIC12.78□□□□□ -0.36
TMEM235A6NFC5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TMEM235A6NFC5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM235A6NFC5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 AC009093.7-201ENST00000623853 1223 ntBASIC12.77□□□□□ -0.37
TMEM235A6NFC5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms