Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 AC015802.1-201ENST00000588104 1449 ntBASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.05□□□□□ -0.16
SH3PXD2BA1X283 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MIR943-201ENST00000401286 94 ntBASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 KLF2P3-201ENST00000451977 1087 ntBASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 IGHV3-42-201ENST00000520410 361 ntBASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 LINC01115-203ENST00000606068 577 ntBASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SH3PXD2BA1X283 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SH3PXD2BA1X283 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms