Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 BNIP3P42-201ENST00000454982 569 ntBASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 AP005482.1-201ENST00000563722 1273 ntBASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 PPY2P-201ENST00000582808 702 ntBASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 BNIP3P29-201ENST00000598302 571 ntBASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 AC011447.5-201ENST00000616168 564 ntBASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DTX4Q9Y2E6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AC002472.3-201ENST00000640124 621 ntBASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DTX4Q9Y2E6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms