Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AL121723.1-201ENST00000445194 1519 ntBASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AC092337.1-201ENST00000568699 1129 ntBASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AC027796.2-201ENST00000575326 344 ntBASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AL390955.2-201ENST00000603032 514 ntBASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AC015818.8-201ENST00000587907 1519 ntBASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HHLA3Q9XRX5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 AC083964.2-201ENST00000623988 2396 ntBASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.97□□□□□ -0.65
HHLA3Q9XRX5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms